Papers - YURA Kei

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  1. タンパク質の立体構造に基づく相互作用構造の推定

    薬学雑誌, , vol.128(11)(p.1547 - 1555), 2008.12, 由良　敬, Survey, Research paper (scientific journal), Single Author

  2. Characteristics and prediction of RNA editing sites in transcripts of the moss Takakia lepidozioides chloroplast

    DNA Research, , vol.15(5)(p.309 - 321), 2008.12, Yura, K., Miyata, Y., Arikawa, T., Higuchi, M., Sugita, M., Original, Research paper (scientific journal), Capital Author

  3. Prediction of Protein-RNA, Protein-Protein and Protein-Ligand Interfaces Based on Protein Sequences and 3D-Structures

    Proceedings of International Symposium on FCS2008, (p.77 - 86), 2008.11, Yura, K., Survey, Research paper (bulletin of university, research institution), Single Author

  4. Key interactions in integrin ectodomain responsible for global conformational change detected by elastic network normal mode analysis

    Biophysical Journal, , vol.95(6)(p.2895 - 2908), 2008.09, Matsumoto, A., Kamata, T., Takagi, J., Iwasaki, K., Yura, K., Original, Research paper (scientific journal), Coauthor

  5. Correlation between amino acid residues converted by RNA editing and functional residues in protein three-dimensional structures in plant organelles

    BMC Plant Biology, , vol.8(p.79 - ), 2008.07, Yura, K., Go, M., Original, Research paper (scientific journal), Capital Author

  6. Discrimination of class I cyclobutane pyrimidine dimer photolyase from blue light photoreceptors by single methionine residue

    Biophysical Journal, , vol.94(6)(p.2194 - 2203), 2008.03, Miyazawa, Y., Nishioka, H., Yura, K., Yamato, T., Original, Research paper (scientific journal), Coauthor

  7. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts

    Nucleic Acids Research, , vol.36(DataBase Issue)(p.D793 - D799), 2008.01, Genome Information Integration Project and H-Invitational 2 consortium, Original, Research paper (scientific journal), Coauthor

  8. coliSNP database server mapping nsSNPs on protein structures

    Nucleic Acids Research, , vol.36(DataBase Issue)(p.D409 - D413), 2008.01, Kono, H., Yuasa, T., Nishiue, S., Yura, K., Original, Research paper (scientific journal), Coauthor

  9. BAAQ: An infrastructure for application integration and knowledge discovery in bioinformatics

    IEEE Transactions on Information Technology in Biomedicine, , vol.11(4)(p.428 - 434), 2007.07, Gong, X., Nakamura, K., Yu, H., Yura, K. Go, N., Original, Research paper (scientific journal), Coauthor

  10. Toward the elucidation of the pathway of integrin conformational changes

    Modern Scientific Instruments, , vol.Supplementary(p.65 - 66), 2006.12, Goto, J., Yasunaga, T., Nagai, R., Matsumoto, A., Yura, K., Takagi, J., Iwasaki, K., Original, Research paper (scientific journal), Coauthor

  11. Amino acid residue doublet propensity in the protein-RNA interface and its application to RNA interface prediction

    Nucleic Acids Research, , vol.34(22)(p.6450 - 6460), 2006.11, Kim, T.P.O., Yura, K., Go, N., Original, Research paper (scientific journal), Coauthor

  12. Alternative splicing in human transcriptome: functional and structural influence on proteins

    Gene, , vol.380(2)(p.63 - 71), 2006.10, Yura, K., Shionyu, M., Hagino, K., Hijikata, A., Hirashima, Y., Nakahara, T., Eguchi, T., Shinoda, K., Yamaguchi, A., Takahashi, K., Itoh, T., Imanishi, T., Gojobori, T., Go, M., Original, Research paper (scientific journal), Capital Author

  13. Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56,419 completely sequenced and manually annotated full-length cDNAs

    Nucleic Acids Research, , vol.34(14)(p.3917 - 3928), 2006.08, Takeda, J., Suzuki, Y., Nakao, M., Barrero, R., Koyanagi, K., Jin, L., Motono, C., Hata, H., Isogai,T., Nagai, K., Otsuki, T., Kuryshev, V., Shionyu, M., Yura, K., Go, M., Thierry-Mieg, J., Thierry-Mieg, D., Wiemann, S., Nomura, N., Sugano, S., Gojobori, T., Imanishi, T., Original, Research paper (scientific journal), Coauthor

  14. Coverage of whole proteome by structural genomics observed through protein homology modeling database

    Journal of Structural and Functional Genomics, , vol.7(2)(p.65 - 76), 2006.06, Yura, K., Yamaguchi, A., Go, M., Original, Research paper (scientific journal), Capital Author

  15. 全ゲノムを対象とした蛋白質立体構造データベースの公開

    蛋白質核酸酵素, , vol.50(p.2301), 2005.12, 由良　敬、山口晶太、郷　通子, Survey, Research paper (scientific journal), Capital Author

  16. Contribution of computational biology and structural genomics to understand genome and transcriptome

    Proc. of the Inter. Symp. on Frontiers of Comp. Sci., (p.75 - 80), 2005.11, Go, M., Yura, K., Shionyu, M., Survey, Research paper (bulletin of university, research institution), Coauthor

  17. A grid-based system for integrating bioinformatics applications

    Proc. IADIS Inter. Conf.: Applied Computing 2005, , vol.1(p.551 - 558), 2005.10, Gong, X.J., Yura, K., Go, N., Original, Research paper (bulletin of university, research institution), Coauthor

  18. Sequence analysis of the gliding protein Gli349 in Mycoplasma mobile

    BIOPHYSICS, , vol.1(p.33 - 43), 2005.05, Metsugi, S., Uenoyama, A., Adan, J., Miyata, M., Yura, K., Kono, H., Go, N., Original, Research paper (scientific journal), Coauthor

  19. Newly sequenced eRF1s from ciliates: the diversity of stop codon usage and the molecular surfaces that are important for stop codon interactions

    Gene, , vol.346(p.277 - 286), 2005.02, Kim, T.P.O., Yura, K., Go, N., Harumoto, T., Original, Research paper (scientific journal), Coauthor

  20. タンパク質のフォールディング:自己組織化と遺伝子のスプライシング

    Bionics, , vol.2(1)(p.38 - 43), 2005.01, 郷　通子、由良　敬, Survey, Research paper (scientific journal), Coauthor

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